Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TcraP01849 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
TcraP01849 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TcraP01849 Gm43963-201ENSMUST00000203466 2488 ntBASIC8.72□□□□□ -1.01
TcraP01849 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TcraP01849 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TcraP01849 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 CT010480.4-201ENSMUST00000224654 2283 ntBASIC8.71□□□□□ -1.01
TcraP01849 Gm6124-201ENSMUST00000188240 2580 ntBASIC8.71□□□□□ -1.01
TcraP01849 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC8.71□□□□□ -1.01
TcraP01849 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC8.71□□□□□ -1.01
TcraP01849 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 Gm45428-201ENSMUST00000209619 1789 ntBASIC8.71□□□□□ -1.01
TcraP01849 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC8.71□□□□□ -1.01
TcraP01849 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC8.71□□□□□ -1.01
TcraP01849 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
TcraP01849 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.01
TcraP01849 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC8.71□□□□□ -1.01
TcraP01849 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC8.71□□□□□ -1.01
TcraP01849 Gm37969-201ENSMUST00000195777 3409 ntBASIC8.71□□□□□ -1.01
TcraP01849 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Gm9466-201ENSMUST00000218144 2246 ntBASIC8.71□□□□□ -1.02
TcraP01849 AC124397.2-201ENSMUST00000225575 2215 ntBASIC8.71□□□□□ -1.02
TcraP01849 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
TcraP01849 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC8.71□□□□□ -1.02
TcraP01849 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Gm12091-201ENSMUST00000146791 830 ntBASIC8.71□□□□□ -1.02
TcraP01849 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC8.71□□□□□ -1.02
TcraP01849 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
TcraP01849 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC8.71□□□□□ -1.02
TcraP01849 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
TcraP01849 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Gm8515-201ENSMUST00000194852 576 ntBASIC8.71□□□□□ -1.02
TcraP01849 Gm5276-201ENSMUST00000196683 1047 ntBASIC8.71□□□□□ -1.02
TcraP01849 Gm43416-201ENSMUST00000201916 1015 ntBASIC8.71□□□□□ -1.02
TcraP01849 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Gm18473-201ENSMUST00000220543 868 ntBASIC8.71□□□□□ -1.02
TcraP01849 CT025535.1-201ENSMUST00000227172 491 ntBASIC8.71□□□□□ -1.02
TcraP01849 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TcraP01849 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
TcraP01849 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC8.71□□□□□ -1.02
TcraP01849 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC8.7□□□□□ -1.02
TcraP01849 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC8.7□□□□□ -1.02
TcraP01849 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
TcraP01849 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
TcraP01849 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TcraP01849 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC8.7□□□□□ -1.02
TcraP01849 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms