Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hcn1O88704 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hcn1O88704 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Hcn1O88704 Gm11930-201ENSMUST00000117788 190 ntBASIC11.47□□□□□ -0.57
Hcn1O88704 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.47□□□□□ -0.57
Hcn1O88704 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.47□□□□□ -0.57
Hcn1O88704 Gm14832-201ENSMUST00000121289 322 ntBASIC11.47□□□□□ -0.57
Hcn1O88704 Gm14760-201ENSMUST00000121831 999 ntBASIC11.47□□□□□ -0.57
Hcn1O88704 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.47□□□□□ -0.57
Hcn1O88704 Gm25668-201ENSMUST00000157700 129 ntBASIC11.47□□□□□ -0.57
Hcn1O88704 Gm24845-201ENSMUST00000158034 109 ntBASIC11.47□□□□□ -0.57
Hcn1O88704 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hcn1O88704 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hcn1O88704 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.47□□□□□ -0.57
Hcn1O88704 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Gm9022-201ENSMUST00000182482 992 ntBASIC11.47□□□□□ -0.57
Hcn1O88704 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.47□□□□□ -0.57
Hcn1O88704 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.47□□□□□ -0.57
Hcn1O88704 Gm6082-201ENSMUST00000215204 454 ntBASIC11.47□□□□□ -0.57
Hcn1O88704 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.47□□□□□ -0.57
Hcn1O88704 Gm8712-201ENSMUST00000221090 701 ntBASIC11.47□□□□□ -0.57
Hcn1O88704 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.47□□□□□ -0.57
Hcn1O88704 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.47□□□□□ -0.57
Hcn1O88704 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Hcn1O88704 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hcn1O88704 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Hcn1O88704 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.46□□□□□ -0.57
Hcn1O88704 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Hcn1O88704 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hcn1O88704 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Hcn1O88704 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.46□□□□□ -0.57
Hcn1O88704 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hcn1O88704 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Hcn1O88704 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.46□□□□□ -0.57
Hcn1O88704 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 Gm28882-201ENSMUST00000185504 314 ntBASIC11.46□□□□□ -0.57
Hcn1O88704 Gm3096-201ENSMUST00000185770 364 ntBASIC11.46□□□□□ -0.57
Hcn1O88704 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 Gm18304-201ENSMUST00000189162 546 ntBASIC11.46□□□□□ -0.57
Hcn1O88704 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.46□□□□□ -0.57
Hcn1O88704 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.46□□□□□ -0.57
Hcn1O88704 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.46□□□□□ -0.57
Hcn1O88704 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Hcn1O88704 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.46□□□□□ -0.57
Hcn1O88704 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hcn1O88704 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.46□□□□□ -0.58
Hcn1O88704 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Hcn1O88704 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hcn1O88704 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hcn1O88704 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hcn1O88704 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hcn1O88704 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hcn1O88704 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Hcn1O88704 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hcn1O88704 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hcn1O88704 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.45□□□□□ -0.58
Hcn1O88704 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hcn1O88704 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hcn1O88704 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.45□□□□□ -0.58
Hcn1O88704 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hcn1O88704 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.45□□□□□ -0.58
Hcn1O88704 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms