Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.77□□□□□ -0.53
ClppO88696 Gm18730-201ENSMUST00000218038 343 ntBASIC11.77□□□□□ -0.53
ClppO88696 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
ClppO88696 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ClppO88696 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.77□□□□□ -0.53
ClppO88696 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
ClppO88696 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ClppO88696 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ClppO88696 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
ClppO88696 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
ClppO88696 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.76□□□□□ -0.53
ClppO88696 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Gm14208-201ENSMUST00000119645 678 ntBASIC11.76□□□□□ -0.53
ClppO88696 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.76□□□□□ -0.53
ClppO88696 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ClppO88696 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Gm28450-201ENSMUST00000187349 638 ntBASIC11.76□□□□□ -0.53
ClppO88696 Gm18304-201ENSMUST00000189162 546 ntBASIC11.76□□□□□ -0.53
ClppO88696 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.76□□□□□ -0.53
ClppO88696 Gm17812-201ENSMUST00000204935 318 ntBASIC11.76□□□□□ -0.53
ClppO88696 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.76□□□□□ -0.53
ClppO88696 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.76□□□□□ -0.53
ClppO88696 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.76□□□□□ -0.53
ClppO88696 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.76□□□□□ -0.53
ClppO88696 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.76□□□□□ -0.53
ClppO88696 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.76□□□□□ -0.53
ClppO88696 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.76□□□□□ -0.53
ClppO88696 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.76□□□□□ -0.53
ClppO88696 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.76□□□□□ -0.53
ClppO88696 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
ClppO88696 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ClppO88696 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.76□□□□□ -0.53
ClppO88696 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClppO88696 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
ClppO88696 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
ClppO88696 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.75□□□□□ -0.53
ClppO88696 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ClppO88696 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
ClppO88696 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.75□□□□□ -0.53
ClppO88696 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.75□□□□□ -0.53
ClppO88696 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.75□□□□□ -0.53
ClppO88696 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.75□□□□□ -0.53
ClppO88696 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.75□□□□□ -0.53
ClppO88696 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 AY036118-201ENSMUST00000200021 923 ntBASIC11.75□□□□□ -0.53
ClppO88696 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.75□□□□□ -0.53
ClppO88696 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.75□□□□□ -0.53
ClppO88696 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.75□□□□□ -0.53
ClppO88696 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.75□□□□□ -0.53
ClppO88696 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClppO88696 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.75□□□□□ -0.53
ClppO88696 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms