Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.45□□□□□ -0.42
Ttc3O88196 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.45□□□□□ -0.42
Ttc3O88196 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.45□□□□□ -0.42
Ttc3O88196 Gm5451-201ENSMUST00000080545 579 ntBASIC12.45□□□□□ -0.42
Ttc3O88196 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Ttc3O88196 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.45□□□□□ -0.42
Ttc3O88196 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ttc3O88196 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.45□□□□□ -0.42
Ttc3O88196 Gm9645-201ENSMUST00000197131 792 ntBASIC12.45□□□□□ -0.42
Ttc3O88196 Gm7940-201ENSMUST00000218195 769 ntBASIC12.45□□□□□ -0.42
Ttc3O88196 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.45□□□□□ -0.42
Ttc3O88196 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Ttc3O88196 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ttc3O88196 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ttc3O88196 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.45□□□□□ -0.42
Ttc3O88196 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Ttc3O88196 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ttc3O88196 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ttc3O88196 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ttc3O88196 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ttc3O88196 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ttc3O88196 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ttc3O88196 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Ttc3O88196 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ttc3O88196 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ttc3O88196 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.44□□□□□ -0.42
Ttc3O88196 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.44□□□□□ -0.42
Ttc3O88196 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.44□□□□□ -0.42
Ttc3O88196 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.44□□□□□ -0.42
Ttc3O88196 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ttc3O88196 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.43□□□□□ -0.42
Ttc3O88196 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.43□□□□□ -0.42
Ttc3O88196 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Ttc3O88196 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.43□□□□□ -0.42
Ttc3O88196 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.43□□□□□ -0.42
Ttc3O88196 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Gm8459-201ENSMUST00000162504 760 ntBASIC12.43□□□□□ -0.42
Ttc3O88196 Gm4654-201ENSMUST00000183305 982 ntBASIC12.43□□□□□ -0.42
Ttc3O88196 Mir6958-201ENSMUST00000184207 73 ntBASIC12.43□□□□□ -0.42
Ttc3O88196 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.43□□□□□ -0.42
Ttc3O88196 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.43□□□□□ -0.42
Ttc3O88196 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.43□□□□□ -0.42
Ttc3O88196 Gm6722-201ENSMUST00000221586 390 ntBASIC12.43□□□□□ -0.42
Ttc3O88196 Lect2-202ENSMUST00000225183 823 ntBASIC12.43□□□□□ -0.42
Ttc3O88196 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ttc3O88196 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ttc3O88196 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ttc3O88196 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ttc3O88196 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.43□□□□□ -0.42
Ttc3O88196 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.43□□□□□ -0.42
Ttc3O88196 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.43□□□□□ -0.42
Ttc3O88196 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Ttc3O88196 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ttc3O88196 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ttc3O88196 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.43□□□□□ -0.42
Ttc3O88196 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.43□□□□□ -0.42
Ttc3O88196 Gm12795-201ENSMUST00000117594 539 ntBASIC12.43□□□□□ -0.42
Ttc3O88196 Gm15374-201ENSMUST00000119313 844 ntBASIC12.43□□□□□ -0.42
Ttc3O88196 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms