Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Alx3O70137 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.1□□□□□ -0.63
Alx3O70137 Gm15225-201ENSMUST00000120449 1017 ntBASIC11.1□□□□□ -0.63
Alx3O70137 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC11.1□□□□□ -0.63
Alx3O70137 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Gm23119-201ENSMUST00000158610 140 ntBASIC11.1□□□□□ -0.63
Alx3O70137 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Alx3O70137 Gm16379-201ENSMUST00000161469 348 ntBASIC11.1□□□□□ -0.63
Alx3O70137 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.1□□□□□ -0.63
Alx3O70137 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Alx3O70137 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC11.1□□□□□ -0.63
Alx3O70137 Gm8762-201ENSMUST00000193486 339 ntBASIC11.1□□□□□ -0.63
Alx3O70137 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.1□□□□□ -0.63
Alx3O70137 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.1□□□□□ -0.63
Alx3O70137 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Alx3O70137 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Alx3O70137 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Alx3O70137 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.09□□□□□ -0.63
Alx3O70137 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Alx3O70137 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.09□□□□□ -0.63
Alx3O70137 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.09□□□□□ -0.63
Alx3O70137 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 Gm24548-201ENSMUST00000158650 108 ntBASIC11.09□□□□□ -0.63
Alx3O70137 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.09□□□□□ -0.63
Alx3O70137 Gm9022-201ENSMUST00000182482 992 ntBASIC11.09□□□□□ -0.63
Alx3O70137 Gm27243-201ENSMUST00000183964 521 ntBASIC11.09□□□□□ -0.63
Alx3O70137 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Alx3O70137 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.09□□□□□ -0.63
Alx3O70137 Gm38384-201ENSMUST00000195413 1122 ntBASIC11.09□□□□□ -0.63
Alx3O70137 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Gm43550-201ENSMUST00000200597 303 ntBASIC11.09□□□□□ -0.63
Alx3O70137 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.09□□□□□ -0.63
Alx3O70137 Gm7653-201ENSMUST00000214567 508 ntBASIC11.09□□□□□ -0.63
Alx3O70137 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.09□□□□□ -0.63
Alx3O70137 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.09□□□□□ -0.63
Alx3O70137 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Alx3O70137 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.09□□□□□ -0.63
Alx3O70137 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Alx3O70137 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Alx3O70137 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms