Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Ldb2O55203 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Ldb2O55203 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ldb2O55203 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ldb2O55203 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.87□□□□□ -0.51
Ldb2O55203 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.87□□□□□ -0.51
Ldb2O55203 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.87□□□□□ -0.51
Ldb2O55203 AY036118-201ENSMUST00000200021 923 ntBASIC11.87□□□□□ -0.51
Ldb2O55203 Gm19287-201ENSMUST00000203190 358 ntBASIC11.87□□□□□ -0.51
Ldb2O55203 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.87□□□□□ -0.51
Ldb2O55203 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ldb2O55203 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.87□□□□□ -0.51
Ldb2O55203 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.87□□□□□ -0.51
Ldb2O55203 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.87□□□□□ -0.51
Ldb2O55203 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ldb2O55203 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ldb2O55203 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.86□□□□□ -0.51
Ldb2O55203 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.86□□□□□ -0.51
Ldb2O55203 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ldb2O55203 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ldb2O55203 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.86□□□□□ -0.51
Ldb2O55203 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Rubie-203ENSMUST00000227803 2430 ntBASIC11.86□□□□□ -0.51
Ldb2O55203 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ldb2O55203 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ldb2O55203 Gm14130-201ENSMUST00000118417 987 ntBASIC11.86□□□□□ -0.51
Ldb2O55203 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.86□□□□□ -0.51
Ldb2O55203 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.86□□□□□ -0.51
Ldb2O55203 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ldb2O55203 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.86□□□□□ -0.51
Ldb2O55203 Gm6114-201ENSMUST00000182472 968 ntBASIC11.86□□□□□ -0.51
Ldb2O55203 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.86□□□□□ -0.51
Ldb2O55203 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Gm5705-201ENSMUST00000066241 711 ntBASIC11.86□□□□□ -0.51
Ldb2O55203 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.86□□□□□ -0.51
Ldb2O55203 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.86□□□□□ -0.51
Ldb2O55203 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ldb2O55203 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.86□□□□□ -0.51
Ldb2O55203 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ldb2O55203 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Ldb2O55203 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Ldb2O55203 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.86□□□□□ -0.51
Ldb2O55203 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ldb2O55203 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.86□□□□□ -0.51
Ldb2O55203 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ldb2O55203 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ldb2O55203 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.85□□□□□ -0.51
Ldb2O55203 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms