Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Stx1aO35526 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.4□□□□□ -0.27
Stx1aO35526 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Stx1aO35526 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.27
Stx1aO35526 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Stx1aO35526 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Stx1aO35526 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Stx1aO35526 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.39□□□□□ -0.27
Stx1aO35526 Rgr-203ENSMUST00000225070 4704 ntBASIC13.39□□□□□ -0.27
Stx1aO35526 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.39□□□□□ -0.27
Stx1aO35526 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Stx1aO35526 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Stx1aO35526 Gm11439-201ENSMUST00000118598 409 ntBASIC13.39□□□□□ -0.27
Stx1aO35526 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.39□□□□□ -0.27
Stx1aO35526 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.39□□□□□ -0.27
Stx1aO35526 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.39□□□□□ -0.27
Stx1aO35526 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.39□□□□□ -0.27
Stx1aO35526 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Stx1aO35526 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Stx1aO35526 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.39□□□□□ -0.27
Stx1aO35526 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.39□□□□□ -0.27
Stx1aO35526 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Stx1aO35526 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Stx1aO35526 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.39□□□□□ -0.27
Stx1aO35526 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Stx1aO35526 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.39□□□□□ -0.27
Stx1aO35526 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.39□□□□□ -0.27
Stx1aO35526 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Stx1aO35526 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Stx1aO35526 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Stx1aO35526 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.38□□□□□ -0.27
Stx1aO35526 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Stx1aO35526 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Gm11700-201ENSMUST00000119409 403 ntBASIC13.38□□□□□ -0.27
Stx1aO35526 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Gm13316-201ENSMUST00000140537 691 ntBASIC13.38□□□□□ -0.27
Stx1aO35526 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.38□□□□□ -0.27
Stx1aO35526 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Stx1aO35526 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Stx1aO35526 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.38□□□□□ -0.27
Stx1aO35526 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.38□□□□□ -0.27
Stx1aO35526 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.38□□□□□ -0.27
Stx1aO35526 Gm9996-201ENSMUST00000070359 913 ntBASIC13.38□□□□□ -0.27
Stx1aO35526 Snora73a-201ENSMUST00000082453 205 ntBASIC13.38□□□□□ -0.27
Stx1aO35526 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Stx1aO35526 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Stx1aO35526 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Stx1aO35526 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.37□□□□□ -0.27
Stx1aO35526 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.37□□□□□ -0.27
Stx1aO35526 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Stx1aO35526 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms