Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.44□□□□□ -0.9
Efnb3O35393 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.44□□□□□ -0.9
Efnb3O35393 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Efnb3O35393 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.44□□□□□ -0.9
Efnb3O35393 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.44□□□□□ -0.9
Efnb3O35393 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.44□□□□□ -0.9
Efnb3O35393 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.44□□□□□ -0.9
Efnb3O35393 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.44□□□□□ -0.9
Efnb3O35393 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Gm9136-201ENSMUST00000193368 454 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 Gm44405-201ENSMUST00000198952 126 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.44□□□□□ -0.9
Efnb3O35393 Gm45925-201ENSMUST00000218882 744 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 Gm5781-201ENSMUST00000219792 443 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Gm10076-201ENSMUST00000073238 384 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 Gm22058-201ENSMUST00000083393 310 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Efnb3O35393 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.44□□□□□ -0.9
Efnb3O35393 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.44□□□□□ -0.9
Efnb3O35393 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Efnb3O35393 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.44□□□□□ -0.9
Efnb3O35393 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Efnb3O35393 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Efnb3O35393 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Efnb3O35393 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.43□□□□□ -0.9
Efnb3O35393 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Efnb3O35393 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.43□□□□□ -0.9
Efnb3O35393 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.43□□□□□ -0.9
Efnb3O35393 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Efnb3O35393 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Efnb3O35393 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Efnb3O35393 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.43□□□□□ -0.9
Efnb3O35393 Gm13226-201ENSMUST00000117838 404 ntBASIC9.43□□□□□ -0.9
Efnb3O35393 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.43□□□□□ -0.9
Efnb3O35393 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Efnb3O35393 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.43□□□□□ -0.9
Efnb3O35393 Gm7029-201ENSMUST00000173226 450 ntBASIC9.43□□□□□ -0.9
Efnb3O35393 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.43□□□□□ -0.9
Efnb3O35393 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC9.43□□□□□ -0.9
Efnb3O35393 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.43□□□□□ -0.9
Efnb3O35393 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Gm5904-201ENSMUST00000210286 865 ntBASIC9.43□□□□□ -0.9
Efnb3O35393 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Efnb3O35393 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms