Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.3□□□□□ -0.44
Trove2O08848 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trove2O08848 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trove2O08848 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trove2O08848 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.29□□□□□ -0.44
Trove2O08848 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trove2O08848 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.29□□□□□ -0.44
Trove2O08848 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.29□□□□□ -0.44
Trove2O08848 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.29□□□□□ -0.44
Trove2O08848 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trove2O08848 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trove2O08848 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.29□□□□□ -0.44
Trove2O08848 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.29□□□□□ -0.44
Trove2O08848 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.29□□□□□ -0.44
Trove2O08848 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.29□□□□□ -0.44
Trove2O08848 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.29□□□□□ -0.44
Trove2O08848 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trove2O08848 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trove2O08848 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trove2O08848 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trove2O08848 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trove2O08848 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.28□□□□□ -0.44
Trove2O08848 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.28□□□□□ -0.44
Trove2O08848 Gm13492-201ENSMUST00000119772 665 ntBASIC12.28□□□□□ -0.44
Trove2O08848 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.28□□□□□ -0.44
Trove2O08848 Gm27731-201ENSMUST00000185192 107 ntBASIC12.28□□□□□ -0.44
Trove2O08848 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.28□□□□□ -0.44
Trove2O08848 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.28□□□□□ -0.44
Trove2O08848 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Trove2O08848 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trove2O08848 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trove2O08848 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trove2O08848 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trove2O08848 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trove2O08848 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Trove2O08848 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.27□□□□□ -0.44
Trove2O08848 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trove2O08848 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.27□□□□□ -0.44
Trove2O08848 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trove2O08848 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.27□□□□□ -0.44
Trove2O08848 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trove2O08848 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms