Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Smim22J3QP37 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.09□□□□□ -0.47
Smim22J3QP37 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smim22J3QP37 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Smim22J3QP37 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smim22J3QP37 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smim22J3QP37 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smim22J3QP37 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smim22J3QP37 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smim22J3QP37 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smim22J3QP37 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Smim22J3QP37 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm13456-201ENSMUST00000118928 1365 ntBASIC12.08□□□□□ -0.48
Smim22J3QP37 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Smim22J3QP37 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Smim22J3QP37 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm23745-201ENSMUST00000104230 125 ntBASIC12.08□□□□□ -0.48
Smim22J3QP37 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm12418-201ENSMUST00000118116 942 ntBASIC12.08□□□□□ -0.48
Smim22J3QP37 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Zfp419-201ENSMUST00000173446 916 ntBASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm28833-201ENSMUST00000189671 559 ntBASIC12.08□□□□□ -0.48
Smim22J3QP37 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm7727-201ENSMUST00000219830 671 ntBASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm18968-201ENSMUST00000221319 862 ntBASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.08□□□□□ -0.48
Smim22J3QP37 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.08□□□□□ -0.48
Smim22J3QP37 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Smim22J3QP37 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smim22J3QP37 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.07□□□□□ -0.48
Smim22J3QP37 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smim22J3QP37 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Gm15004-201ENSMUST00000119192 630 ntBASIC12.07□□□□□ -0.48
Smim22J3QP37 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Smim22J3QP37 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.07□□□□□ -0.48
Smim22J3QP37 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.07□□□□□ -0.48
Smim22J3QP37 Gm8018-201ENSMUST00000173536 789 ntBASIC12.07□□□□□ -0.48
Smim22J3QP37 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Smim22J3QP37 Gm6606-201ENSMUST00000193613 947 ntBASIC12.07□□□□□ -0.48
Smim22J3QP37 Gm42430-201ENSMUST00000197209 616 ntBASIC12.07□□□□□ -0.48
Smim22J3QP37 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC12.07□□□□□ -0.48
Smim22J3QP37 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC12.07□□□□□ -0.48
Smim22J3QP37 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.07□□□□□ -0.48
Smim22J3QP37 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Smim22J3QP37 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smim22J3QP37 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smim22J3QP37 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms