Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Gm29067-201ENSMUST00000190821 470 ntBASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Gm19587-201ENSMUST00000191395 545 ntBASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Gm43163-201ENSMUST00000196571 442 ntBASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Gm6653-201ENSMUST00000218063 1288 ntBASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Gm18514-201ENSMUST00000218980 436 ntBASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Gm5468-202ENSMUST00000227851 682 ntBASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Rab3c-202ENSMUST00000223922 2398 ntBASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcf11G3X9Z4 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm13047-201ENSMUST00000117116 815 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm15329-201ENSMUST00000121408 155 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm44323-201ENSMUST00000198689 129 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm45856-201ENSMUST00000212752 416 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm9111-201ENSMUST00000219394 709 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 CT030653.1-201ENSMUST00000224382 1279 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm38194-201ENSMUST00000194529 2211 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm25053-201ENSMUST00000103982 133 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm25922-201ENSMUST00000104281 130 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm12816-201ENSMUST00000118069 1212 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm13284-201ENSMUST00000121020 547 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm24679-201ENSMUST00000158762 111 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm4895-201ENSMUST00000181646 1137 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm25053-202ENSMUST00000199731 132 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 AC154305.2-201ENSMUST00000225813 901 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 AC159002.1-201ENSMUST00000226714 924 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm5805-201ENSMUST00000072779 456 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 n-R5s185-201ENSMUST00000083953 119 ntBASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcf11G3X9Z4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Gm6322-201ENSMUST00000118789 1004 ntBASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Gm9673-201ENSMUST00000119287 781 ntBASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcf11G3X9Z4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcf11G3X9Z4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 122.1 ms