Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clca3bE9PUL3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Gm12165-201ENSMUST00000117047 342 ntBASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Gm12579-201ENSMUST00000118040 783 ntBASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Gm8815-201ENSMUST00000173809 620 ntBASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Spcs1-203ENSMUST00000226374 592 ntBASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.84□□□□□ -0.35
Clca3bE9PUL3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Clca3bE9PUL3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Clca3bE9PUL3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Clca3bE9PUL3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Clca3bE9PUL3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Clca3bE9PUL3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Clca3bE9PUL3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.83□□□□□ -0.36
Clca3bE9PUL3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Gm11331-201ENSMUST00000119764 288 ntBASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Clca3bE9PUL3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms