Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm27572-201ENSMUST00000183702 255 ntBASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm28043E0CXC2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Gm6013-201ENSMUST00000212264 699 ntBASIC12.01□□□□□ -0.49
Gm28043E0CXC2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm28043E0CXC2 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12□□□□□ -0.49
Gm28043E0CXC2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Gm12058-201ENSMUST00000118614 437 ntBASIC12□□□□□ -0.49
Gm28043E0CXC2 Gm13315-201ENSMUST00000120376 991 ntBASIC12□□□□□ -0.49
Gm28043E0CXC2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12□□□□□ -0.49
Gm28043E0CXC2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12□□□□□ -0.49
Gm28043E0CXC2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Gm28043E0CXC2 CU024892.2-201ENSMUST00000224608 832 ntBASIC12□□□□□ -0.49
Gm28043E0CXC2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Gm9823-201ENSMUST00000051212 327 ntBASIC12□□□□□ -0.49
Gm28043E0CXC2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12□□□□□ -0.49
Gm28043E0CXC2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Gm28043E0CXC2 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Gm28043E0CXC2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm28043E0CXC2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms