Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.25□□□□□ -0.29
Krt28A6BLY7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Krt28A6BLY7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.24□□□□□ -0.29
Krt28A6BLY7 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.24□□□□□ -0.29
Krt28A6BLY7 BC106175-202ENSMUST00000219344 1213 ntBASIC13.24□□□□□ -0.29
Krt28A6BLY7 Gm18968-201ENSMUST00000221319 862 ntBASIC13.24□□□□□ -0.29
Krt28A6BLY7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.24□□□□□ -0.29
Krt28A6BLY7 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.24□□□□□ -0.29
Krt28A6BLY7 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Krt28A6BLY7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Krt28A6BLY7 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.23□□□□□ -0.29
Krt28A6BLY7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.23□□□□□ -0.29
Krt28A6BLY7 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.23□□□□□ -0.29
Krt28A6BLY7 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.23□□□□□ -0.29
Krt28A6BLY7 Gm7940-201ENSMUST00000218195 769 ntBASIC13.23□□□□□ -0.29
Krt28A6BLY7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Krt28A6BLY7 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms