Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1aA2APX8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Gm20495-201ENSMUST00000173902 235 ntBASIC12.46□□□□□ -0.41
Scn1aA2APX8 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Gm37458-201ENSMUST00000194055 410 ntBASIC12.46□□□□□ -0.41
Scn1aA2APX8 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Gm44980-201ENSMUST00000205826 314 ntBASIC12.46□□□□□ -0.41
Scn1aA2APX8 Gm7940-201ENSMUST00000218195 769 ntBASIC12.46□□□□□ -0.41
Scn1aA2APX8 Gm4978-201ENSMUST00000071565 801 ntBASIC12.46□□□□□ -0.41
Scn1aA2APX8 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1aA2APX8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1aA2APX8 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1aA2APX8 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1aA2APX8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1aA2APX8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1aA2APX8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1aA2APX8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1aA2APX8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Scn1aA2APX8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Scn1aA2APX8 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Gm22902-201ENSMUST00000158488 302 ntBASIC12.45□□□□□ -0.42
Scn1aA2APX8 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Gm8574-201ENSMUST00000203207 924 ntBASIC12.45□□□□□ -0.42
Scn1aA2APX8 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.45□□□□□ -0.42
Scn1aA2APX8 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.45□□□□□ -0.42
Scn1aA2APX8 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.45□□□□□ -0.42
Scn1aA2APX8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Scn1aA2APX8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.45□□□□□ -0.42
Scn1aA2APX8 Gm4726-201ENSMUST00000135604 736 ntBASIC12.45□□□□□ -0.42
Scn1aA2APX8 Gm6019-201ENSMUST00000148369 736 ntBASIC12.45□□□□□ -0.42
Scn1aA2APX8 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.45□□□□□ -0.42
Scn1aA2APX8 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.45□□□□□ -0.42
Scn1aA2APX8 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1aA2APX8 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm43186-201ENSMUST00000198130 824 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm5051-201ENSMUST00000204085 485 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Gm43916-201ENSMUST00000205062 967 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.44□□□□□ -0.42
Scn1aA2APX8 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1aA2APX8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms