Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm3854A0A1B0GSS6 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm3854A0A1B0GSS6 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Gm3854A0A1B0GSS6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm3854A0A1B0GSS6 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm3854A0A1B0GSS6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Gm3854A0A1B0GSS6 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Mir1901-201ENSMUST00000122616 78 ntBASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm17877-201ENSMUST00000192578 814 ntBASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm37028-201ENSMUST00000194276 107 ntBASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm3854A0A1B0GSS6 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm24844-201ENSMUST00000158679 127 ntBASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm18367-201ENSMUST00000176139 600 ntBASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm21092-201ENSMUST00000178995 955 ntBASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm42518-201ENSMUST00000196277 938 ntBASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm42657-201ENSMUST00000201746 211 ntBASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm43852-201ENSMUST00000202098 917 ntBASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm44506-201ENSMUST00000206278 965 ntBASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm3854A0A1B0GSS6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms