Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Snora78-201ENSMUST00000158630 128 ntBASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Gm42937-201ENSMUST00000197360 752 ntBASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav5-4A0A075B652 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm24934-201ENSMUST00000103764 111 ntBASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm2546-201ENSMUST00000182630 991 ntBASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav5-4A0A075B652 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms