Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm42602-201ENSMUST00000200288 3224 ntBASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm9361-201ENSMUST00000198695 1507 ntBASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav8-1A0A075B641 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gm45089-201ENSMUST00000208082 2040 ntBASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 AC101945.2-201ENSMUST00000227886 1377 ntBASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gm15371-201ENSMUST00000117057 784 ntBASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gm16202-201ENSMUST00000117532 544 ntBASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gm13616-201ENSMUST00000120600 222 ntBASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gm21854-201ENSMUST00000179901 471 ntBASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 CT010486.3-201ENSMUST00000224555 811 ntBASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gm16372-201ENSMUST00000073088 450 ntBASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Gm45428-201ENSMUST00000209619 1789 ntBASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav8-1A0A075B641 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav8-1A0A075B641 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav8-1A0A075B641 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav8-1A0A075B641 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav8-1A0A075B641 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav8-1A0A075B641 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms