Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.96□□□□□ -0.49
H2afb2S4R1M3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.5
H2afb2S4R1M3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb2S4R1M3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
H2afb2S4R1M3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
H2afb2S4R1M3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb2S4R1M3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb2S4R1M3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.96□□□□□ -0.5
H2afb2S4R1M3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
H2afb2S4R1M3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb2S4R1M3 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb2S4R1M3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afb2S4R1M3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
H2afb2S4R1M3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm11511-201ENSMUST00000118146 540 ntBASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm14441-201ENSMUST00000121960 540 ntBASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm15276-201ENSMUST00000145953 498 ntBASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm45331-201ENSMUST00000209868 554 ntBASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm13097-201ENSMUST00000210722 397 ntBASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm5455-201ENSMUST00000058710 715 ntBASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afb2S4R1M3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
H2afb2S4R1M3 Gm7783-201ENSMUST00000204795 781 ntBASIC11.94□□□□□ -0.5
H2afb2S4R1M3 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms