Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mrpl40Q9Z2Q5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm13315-201ENSMUST00000120376 991 ntBASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm24845-201ENSMUST00000158034 109 ntBASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Mir5120-201ENSMUST00000175020 78 ntBASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm5070-201ENSMUST00000177599 862 ntBASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm28882-201ENSMUST00000185504 314 ntBASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm39404-201ENSMUST00000216350 313 ntBASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm10076-201ENSMUST00000073238 384 ntBASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mrpl40Q9Z2Q5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm7857-201ENSMUST00000117957 358 ntBASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm11597-201ENSMUST00000121423 964 ntBASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Mir3547-201ENSMUST00000175461 88 ntBASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mrpl40Q9Z2Q5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms