Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gm25880-201ENSMUST00000104331 132 ntBASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Gm12795-201ENSMUST00000117594 539 ntBASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Gm9062-201ENSMUST00000117712 727 ntBASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Gm15878-201ENSMUST00000127561 306 ntBASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Gm19170-201ENSMUST00000212440 1084 ntBASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Olfr170-203ENSMUST00000218837 1008 ntAPPRIS P2 BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 AC121542.1-201ENSMUST00000227245 721 ntBASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 AC154838.3-201ENSMUST00000228876 965 ntBASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Olfr170-201ENSMUST00000078603 1008 ntAPPRIS ALT1 BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lhx6Q9R1R0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.96□□□□□ -0.5
Lhx6Q9R1R0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Lhx6Q9R1R0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx6Q9R1R0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx6Q9R1R0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx6Q9R1R0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.96□□□□□ -0.5
Lhx6Q9R1R0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Lhx6Q9R1R0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx6Q9R1R0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lhx6Q9R1R0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.96□□□□□ -0.5
Lhx6Q9R1R0 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.96□□□□□ -0.5
Lhx6Q9R1R0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm45793-201ENSMUST00000207900 1342 ntBASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm15443-201ENSMUST00000118947 820 ntBASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm13408-201ENSMUST00000119822 798 ntBASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm13935-201ENSMUST00000121859 798 ntBASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 3110056K07Rik-201ENSMUST00000127129 722 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm43556-201ENSMUST00000196186 681 ntBASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm42733-201ENSMUST00000201272 519 ntBASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm44636-201ENSMUST00000206130 755 ntBASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm17850-201ENSMUST00000210023 1154 ntBASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 AC153974.1-202ENSMUST00000218700 678 ntTSL 3 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm10145-201ENSMUST00000077776 462 ntBASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm10705-201ENSMUST00000098980 461 ntBASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lhx6Q9R1R0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx6Q9R1R0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lhx6Q9R1R0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx6Q9R1R0 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx6Q9R1R0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx6Q9R1R0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lhx6Q9R1R0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms