Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.68□□□□□ -0.7
Nubp2Q9R061 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Nubp2Q9R061 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.67□□□□□ -0.7
Nubp2Q9R061 Gm24231-201ENSMUST00000104315 133 ntBASIC10.67□□□□□ -0.7
Nubp2Q9R061 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Gm15276-201ENSMUST00000145953 498 ntBASIC10.67□□□□□ -0.7
Nubp2Q9R061 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Rmrp-201ENSMUST00000157463 271 ntBASIC10.67□□□□□ -0.7
Nubp2Q9R061 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Gm27046-201ENSMUST00000182160 463 ntBASIC10.67□□□□□ -0.7
Nubp2Q9R061 Gm29199-201ENSMUST00000187766 775 ntBASIC10.67□□□□□ -0.7
Nubp2Q9R061 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.67□□□□□ -0.7
Nubp2Q9R061 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nubp2Q9R061 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.66□□□□□ -0.7
Nubp2Q9R061 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.66□□□□□ -0.7
Nubp2Q9R061 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.66□□□□□ -0.7
Nubp2Q9R061 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.66□□□□□ -0.7
Nubp2Q9R061 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Mir433-201ENSMUST00000093564 124 ntBASIC10.66□□□□□ -0.7
Nubp2Q9R061 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Nubp2Q9R061 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms