Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Gm4909-201ENSMUST00000118749 794 ntBASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Clcf1Q9QZM3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Gm12217-201ENSMUST00000118858 696 ntBASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Gm24749-201ENSMUST00000157838 343 ntBASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Mir3102-201ENSMUST00000175555 104 ntBASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Gm37666-201ENSMUST00000194110 866 ntBASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clcf1Q9QZM3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clcf1Q9QZM3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms