Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Gm14058-201ENSMUST00000116082 735 ntBASIC10.97□□□□□ -0.65
Prg4Q9JM99 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Gm12566-201ENSMUST00000121479 359 ntBASIC10.97□□□□□ -0.65
Prg4Q9JM99 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Prg4Q9JM99 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Gm4310-201ENSMUST00000177847 889 ntBASIC10.97□□□□□ -0.65
Prg4Q9JM99 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Prg4Q9JM99 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.97□□□□□ -0.65
Prg4Q9JM99 Gm37629-201ENSMUST00000193635 1050 ntBASIC10.97□□□□□ -0.65
Prg4Q9JM99 Gm43378-201ENSMUST00000199336 582 ntBASIC10.97□□□□□ -0.65
Prg4Q9JM99 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC10.97□□□□□ -0.65
Prg4Q9JM99 Gm9520-201ENSMUST00000209460 1253 ntBASIC10.97□□□□□ -0.65
Prg4Q9JM99 Gm5369-201ENSMUST00000217499 588 ntBASIC10.97□□□□□ -0.65
Prg4Q9JM99 AC172027.1-201ENSMUST00000217659 337 ntBASIC10.97□□□□□ -0.65
Prg4Q9JM99 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Gm45657-201ENSMUST00000211318 1349 ntBASIC10.97□□□□□ -0.65
Prg4Q9JM99 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Prg4Q9JM99 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.96□□□□□ -0.65
Prg4Q9JM99 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Gm18719-201ENSMUST00000196696 1413 ntBASIC10.96□□□□□ -0.65
Prg4Q9JM99 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Gm14441-201ENSMUST00000121960 540 ntBASIC10.96□□□□□ -0.65
Prg4Q9JM99 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.96□□□□□ -0.65
Prg4Q9JM99 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.96□□□□□ -0.65
Prg4Q9JM99 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Gm18827-201ENSMUST00000188341 790 ntBASIC10.96□□□□□ -0.65
Prg4Q9JM99 Gm38117-201ENSMUST00000194653 939 ntBASIC10.96□□□□□ -0.65
Prg4Q9JM99 Gm6905-201ENSMUST00000205729 511 ntBASIC10.96□□□□□ -0.65
Prg4Q9JM99 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Nsd1-205ENSMUST00000224693 852 ntBASIC10.96□□□□□ -0.65
Prg4Q9JM99 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Prg4Q9JM99 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.96□□□□□ -0.65
Prg4Q9JM99 Gm10288-201ENSMUST00000084614 537 ntBASIC10.96□□□□□ -0.65
Prg4Q9JM99 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Pck2-205ENSMUST00000226352 2784 ntBASIC10.96□□□□□ -0.66
Prg4Q9JM99 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Map1b-203ENSMUST00000223725 2669 ntBASIC10.96□□□□□ -0.66
Prg4Q9JM99 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Prg4Q9JM99 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prg4Q9JM99 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prg4Q9JM99 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Prg4Q9JM99 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prg4Q9JM99 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prg4Q9JM99 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.95□□□□□ -0.66
Prg4Q9JM99 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prg4Q9JM99 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.95□□□□□ -0.66
Prg4Q9JM99 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prg4Q9JM99 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Prg4Q9JM99 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prg4Q9JM99 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms