Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Gm19587-201ENSMUST00000191395 545 ntBASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Gm42816-201ENSMUST00000198433 325 ntBASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Gm45135-201ENSMUST00000206787 1184 ntBASIC9.62□□□□□ -0.87
Crlf1Q9JM58 AC158388.3-202ENSMUST00000225517 775 ntBASIC9.62□□□□□ -0.87
Crlf1Q9JM58 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Gm5513-201ENSMUST00000072982 1218 ntBASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Gm16380-201ENSMUST00000077997 478 ntBASIC9.62□□□□□ -0.87
Crlf1Q9JM58 n-R5s185-201ENSMUST00000083953 119 ntBASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Gm42748-201ENSMUST00000199354 2341 ntBASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Crlf1Q9JM58 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Gm22594-201ENSMUST00000104251 130 ntBASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Gm22379-201ENSMUST00000157480 131 ntBASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 AC238811.4-201ENSMUST00000178019 1246 ntBASIC9.61□□□□□ -0.87
Crlf1Q9JM58 AC238940.3-201ENSMUST00000178830 1246 ntBASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 AC130477.1-201ENSMUST00000226982 420 ntBASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Crlf1Q9JM58 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Crlf1Q9JM58 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Crlf1Q9JM58 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Crlf1Q9JM58 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Crlf1Q9JM58 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Crlf1Q9JM58 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Crlf1Q9JM58 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Crlf1Q9JM58 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms