Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm6423-201ENSMUST00000204315 934 ntBASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Gm14005-208ENSMUST00000223654 681 ntBASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkx2-4Q9EQM3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm22594-201ENSMUST00000104251 130 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm6630-201ENSMUST00000119199 454 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm17214-201ENSMUST00000164501 541 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm17070-201ENSMUST00000170463 784 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm18801-201ENSMUST00000186616 536 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm43380-201ENSMUST00000200421 220 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm44882-201ENSMUST00000205702 802 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Cog3-203ENSMUST00000227473 4197 ntBASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nkx2-4Q9EQM3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gm11244-201ENSMUST00000121243 237 ntBASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nkx2-4Q9EQM3 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms