Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Gm13996-201ENSMUST00000118456 430 ntBASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Gm5616-201ENSMUST00000165252 384 ntBASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Gm8741-201ENSMUST00000174736 384 ntBASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Gm17812-201ENSMUST00000204935 318 ntBASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf6Q9DBU5 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Gm15004-201ENSMUST00000119192 630 ntBASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Gm27627-201ENSMUST00000183644 150 ntBASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 AY036118-201ENSMUST00000200021 923 ntBASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf6Q9DBU5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 Gm14130-201ENSMUST00000118417 987 ntBASIC12.81□□□□□ -0.36
Rnf6Q9DBU5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms