Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Gm12164-201ENSMUST00000121695 551 ntBASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Gm24749-201ENSMUST00000157838 343 ntBASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Gm27627-201ENSMUST00000183644 150 ntBASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Map1b-203ENSMUST00000223725 2669 ntBASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp2aQ9DB34 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm13996-201ENSMUST00000118456 430 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm14277-201ENSMUST00000121195 360 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm2260-201ENSMUST00000184965 657 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm29615-201ENSMUST00000185371 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm28224-201ENSMUST00000186078 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm29001-201ENSMUST00000186177 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm28292-201ENSMUST00000186593 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm28101-201ENSMUST00000187608 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm29076-201ENSMUST00000187689 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm28302-201ENSMUST00000187931 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm28646-201ENSMUST00000188220 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm28205-201ENSMUST00000189177 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm29032-201ENSMUST00000189797 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm28695-201ENSMUST00000190300 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm37448-201ENSMUST00000192795 697 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm43962-201ENSMUST00000203898 190 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm45186-201ENSMUST00000206874 478 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp2aQ9DB34 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms