Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
U2af1Q9D883 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC15.71■□□□□ 0.11
U2af1Q9D883 Gm2965-201ENSMUST00000198365 343 ntBASIC15.71■□□□□ 0.11
U2af1Q9D883 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.71■□□□□ 0.11
U2af1Q9D883 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Gm10288-201ENSMUST00000084614 537 ntBASIC15.71■□□□□ 0.11
U2af1Q9D883 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
U2af1Q9D883 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
U2af1Q9D883 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.71■□□□□ 0.11
U2af1Q9D883 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
U2af1Q9D883 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
U2af1Q9D883 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
U2af1Q9D883 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
U2af1Q9D883 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
U2af1Q9D883 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
U2af1Q9D883 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.7■□□□□ 0.1
U2af1Q9D883 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.7■□□□□ 0.1
U2af1Q9D883 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC15.7■□□□□ 0.1
U2af1Q9D883 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.7■□□□□ 0.1
U2af1Q9D883 Gm23251-201ENSMUST00000103773 110 ntBASIC15.7■□□□□ 0.1
U2af1Q9D883 Gm11331-201ENSMUST00000119764 288 ntBASIC15.7■□□□□ 0.1
U2af1Q9D883 Gm8199-201ENSMUST00000121323 823 ntBASIC15.7■□□□□ 0.1
U2af1Q9D883 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
U2af1Q9D883 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Spcs1-203ENSMUST00000226374 592 ntBASIC15.7■□□□□ 0.1
U2af1Q9D883 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC15.7■□□□□ 0.1
U2af1Q9D883 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC15.7■□□□□ 0.1
U2af1Q9D883 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
U2af1Q9D883 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.7■□□□□ 0.1
U2af1Q9D883 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
U2af1Q9D883 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
U2af1Q9D883 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
U2af1Q9D883 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
U2af1Q9D883 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Gm13461-201ENSMUST00000120980 662 ntBASIC15.69■□□□□ 0.1
U2af1Q9D883 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Gm23085-201ENSMUST00000157849 293 ntBASIC15.69■□□□□ 0.1
U2af1Q9D883 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.69■□□□□ 0.1
U2af1Q9D883 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
U2af1Q9D883 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.69■□□□□ 0.1
U2af1Q9D883 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.69■□□□□ 0.1
U2af1Q9D883 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.69■□□□□ 0.1
U2af1Q9D883 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
U2af1Q9D883 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
U2af1Q9D883 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.68■□□□□ 0.1
U2af1Q9D883 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
U2af1Q9D883 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
U2af1Q9D883 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
U2af1Q9D883 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
U2af1Q9D883 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
U2af1Q9D883 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
U2af1Q9D883 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
U2af1Q9D883 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
U2af1Q9D883 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
U2af1Q9D883 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
U2af1Q9D883 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
U2af1Q9D883 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
U2af1Q9D883 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
U2af1Q9D883 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
U2af1Q9D883 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
U2af1Q9D883 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms