Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Gm9083-201ENSMUST00000120423 819 ntBASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Gm45784-201ENSMUST00000188360 142 ntBASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Gm6266-201ENSMUST00000203844 806 ntBASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Gm22058-201ENSMUST00000083393 310 ntBASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ska1Q9CPV1 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.32□□□□□ -0.6
Ska1Q9CPV1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Gm27731-201ENSMUST00000185192 107 ntBASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.32□□□□□ -0.6
Ska1Q9CPV1 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska1Q9CPV1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska1Q9CPV1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms