Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.98□□□□□ -0.49
Trim33Q99PP7 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.98□□□□□ -0.49
Trim33Q99PP7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim33Q99PP7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trim33Q99PP7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm38359-201ENSMUST00000191884 2225 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm14109-201ENSMUST00000118814 309 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Mir6420-201ENSMUST00000185032 102 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm18351-201ENSMUST00000188646 883 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm44044-201ENSMUST00000205178 1089 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm9996-201ENSMUST00000070359 913 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm10312-201ENSMUST00000078515 489 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim33Q99PP7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim33Q99PP7 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim33Q99PP7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Gm24830-201ENSMUST00000102024 166 ntBASIC11.96□□□□□ -0.49
Trim33Q99PP7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.96□□□□□ -0.49
Trim33Q99PP7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Gm27320-201ENSMUST00000184892 109 ntBASIC11.96□□□□□ -0.49
Trim33Q99PP7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.96□□□□□ -0.49
Trim33Q99PP7 Gm8885-201ENSMUST00000189382 598 ntBASIC11.96□□□□□ -0.49
Trim33Q99PP7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms