Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.74□□□□□ -0.05
Trim34aQ99PP6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trim34aQ99PP6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim34aQ99PP6 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim34aQ99PP6 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim34aQ99PP6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim34aQ99PP6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim34aQ99PP6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim34aQ99PP6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim34aQ99PP6 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim34aQ99PP6 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim34aQ99PP6 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Gm25076-201ENSMUST00000104098 132 ntBASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Gm7150-201ENSMUST00000122032 981 ntBASIC14.73□□□□□ -0.05
Trim34aQ99PP6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Gm45113-201ENSMUST00000207518 165 ntBASIC14.73□□□□□ -0.05
Trim34aQ99PP6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.73□□□□□ -0.05
Trim34aQ99PP6 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.73□□□□□ -0.05
Trim34aQ99PP6 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim34aQ99PP6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Gm7940-201ENSMUST00000218195 769 ntBASIC14.72□□□□□ -0.05
Trim34aQ99PP6 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim34aQ99PP6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Gm22442-201ENSMUST00000157256 144 ntBASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.71□□□□□ -0.05
Trim34aQ99PP6 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms