Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.07□□□□□ -0.48
Cdk9Q99J95 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.07□□□□□ -0.48
Cdk9Q99J95 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk9Q99J95 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.06□□□□□ -0.48
Cdk9Q99J95 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Cdk9Q99J95 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm27243-201ENSMUST00000183964 521 ntBASIC12.06□□□□□ -0.48
Cdk9Q99J95 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm7561-201ENSMUST00000211203 886 ntBASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm32025-201ENSMUST00000217960 307 ntBASIC12.06□□□□□ -0.48
Cdk9Q99J95 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.06□□□□□ -0.48
Cdk9Q99J95 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.06□□□□□ -0.48
Cdk9Q99J95 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.06□□□□□ -0.48
Cdk9Q99J95 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk9Q99J95 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.05□□□□□ -0.48
Cdk9Q99J95 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.05□□□□□ -0.48
Cdk9Q99J95 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.05□□□□□ -0.48
Cdk9Q99J95 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Gm6091-201ENSMUST00000098307 165 ntBASIC12.05□□□□□ -0.48
Cdk9Q99J95 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdk9Q99J95 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdk9Q99J95 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.04□□□□□ -0.48
Cdk9Q99J95 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms