Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smc1bQ920F6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Smc1bQ920F6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Mir6546-201ENSMUST00000184460 62 ntBASIC13.87□□□□□ -0.19
Smc1bQ920F6 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.87□□□□□ -0.19
Smc1bQ920F6 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.87□□□□□ -0.19
Smc1bQ920F6 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.87□□□□□ -0.19
Smc1bQ920F6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smc1bQ920F6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.86□□□□□ -0.19
Smc1bQ920F6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.86□□□□□ -0.19
Smc1bQ920F6 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Gm15881-201ENSMUST00000148792 942 ntBASIC13.86□□□□□ -0.19
Smc1bQ920F6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.86□□□□□ -0.19
Smc1bQ920F6 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.86□□□□□ -0.19
Smc1bQ920F6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Smc1bQ920F6 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Gm7851-201ENSMUST00000117574 323 ntBASIC13.85□□□□□ -0.19
Smc1bQ920F6 Gm11340-201ENSMUST00000119226 412 ntBASIC13.85□□□□□ -0.19
Smc1bQ920F6 Gm13315-201ENSMUST00000120376 991 ntBASIC13.85□□□□□ -0.19
Smc1bQ920F6 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Gm7666-201ENSMUST00000146631 819 ntBASIC13.85□□□□□ -0.19
Smc1bQ920F6 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.85□□□□□ -0.19
Smc1bQ920F6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.85□□□□□ -0.19
Smc1bQ920F6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms