Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhb20Q91XZ9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm12241-201ENSMUST00000118330 726 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm14335-201ENSMUST00000119165 810 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm13813-201ENSMUST00000120998 787 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm27001-201ENSMUST00000182252 936 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm6321-201ENSMUST00000194460 1090 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm43992-201ENSMUST00000204358 197 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm44232-201ENSMUST00000204537 225 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 AC164297.5-201ENSMUST00000224365 198 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 AC134414.1-201ENSMUST00000228499 1221 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdhb20Q91XZ9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb20Q91XZ9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb20Q91XZ9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.27□□□□□ -0.44
Pcdhb20Q91XZ9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb20Q91XZ9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb20Q91XZ9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb20Q91XZ9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb20Q91XZ9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb20Q91XZ9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb20Q91XZ9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdhb20Q91XZ9 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm15573-201ENSMUST00000119487 540 ntBASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm24532-201ENSMUST00000157951 286 ntBASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm18200-201ENSMUST00000173265 833 ntBASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm18190-201ENSMUST00000174801 832 ntBASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm19002-201ENSMUST00000192649 1012 ntBASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm5684-201ENSMUST00000198419 961 ntBASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm3961-201ENSMUST00000204425 994 ntBASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdhb20Q91XZ9 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms