Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Gm3650-201ENSMUST00000180600 747 ntBASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Gm27731-201ENSMUST00000185192 107 ntBASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Gm37576-201ENSMUST00000194228 372 ntBASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Gm4870-201ENSMUST00000198525 1251 ntBASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb3Q91XZ7 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm8213-201ENSMUST00000118191 441 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm11803-201ENSMUST00000119966 444 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm11980-201ENSMUST00000121445 986 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm6027-201ENSMUST00000121467 756 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm10156-201ENSMUST00000122364 462 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm28195-201ENSMUST00000186992 372 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gm8598-201ENSMUST00000221184 836 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb3Q91XZ7 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms