Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm25043-201ENSMUST00000158604 212 ntBASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gm26956-201ENSMUST00000182176 986 ntBASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gm27501-201ENSMUST00000183599 107 ntBASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gm28882-201ENSMUST00000185504 314 ntBASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gm4034-201ENSMUST00000187674 480 ntBASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gm5950-201ENSMUST00000213337 772 ntBASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pcdhga3Q91XY5 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Pcdhga3Q91XY5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Pcdhga3Q91XY5 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms