Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Gm23119-201ENSMUST00000158610 140 ntBASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Gm9630-201ENSMUST00000178304 885 ntBASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Gm9996-201ENSMUST00000070359 913 ntBASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhga4Q91XY4 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm9083-201ENSMUST00000120423 819 ntBASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm14760-201ENSMUST00000121831 999 ntBASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm6963-201ENSMUST00000147879 379 ntBASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm18056-201ENSMUST00000207670 568 ntBASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm18061-201ENSMUST00000208350 562 ntBASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm18063-201ENSMUST00000208529 568 ntBASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm18052-201ENSMUST00000208750 559 ntBASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm45598-202ENSMUST00000210719 986 ntBASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhga4Q91XY4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdhga4Q91XY4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdhga4Q91XY4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Pcdhga4Q91XY4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdhga4Q91XY4 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Pcdhga4Q91XY4 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga4Q91XY4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms