Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Gm12516-201ENSMUST00000120819 385 ntBASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Gm42518-201ENSMUST00000196277 938 ntBASIC12□□□□□ -0.49
Pcdhga6Q91XY2 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Gm44401-201ENSMUST00000204462 2375 ntBASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Gm5847-201ENSMUST00000178959 1595 ntBASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhga6Q91XY2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Gm23596-201ENSMUST00000104304 132 ntBASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Gm11989-201ENSMUST00000117240 672 ntBASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Gm11362-201ENSMUST00000118838 850 ntBASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Gm13315-201ENSMUST00000120376 991 ntBASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhga6Q91XY2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhga6Q91XY2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms