Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.87□□□□□ -0.51
Vsx1Q91V10 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Gm43778-201ENSMUST00000199438 199 ntBASIC11.87□□□□□ -0.51
Vsx1Q91V10 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.87□□□□□ -0.51
Vsx1Q91V10 Gm2875-201ENSMUST00000211333 360 ntBASIC11.87□□□□□ -0.51
Vsx1Q91V10 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.87□□□□□ -0.51
Vsx1Q91V10 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.87□□□□□ -0.51
Vsx1Q91V10 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Gm25201-201ENSMUST00000083093 170 ntBASIC11.87□□□□□ -0.51
Vsx1Q91V10 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.87□□□□□ -0.51
Vsx1Q91V10 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx1Q91V10 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm26286-201ENSMUST00000104166 134 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm16166-201ENSMUST00000118291 787 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm12948-201ENSMUST00000119406 682 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm22442-201ENSMUST00000157256 144 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 Rprl1-201ENSMUST00000158050 327 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm23119-201ENSMUST00000158610 140 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm42779-201ENSMUST00000198807 406 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm44124-201ENSMUST00000204159 472 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Mt1-202ENSMUST00000211807 1085 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.86□□□□□ -0.51
Vsx1Q91V10 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx1Q91V10 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vsx1Q91V10 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms