Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rprd1aQ8VDS4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Gm15711-201ENSMUST00000118889 535 ntBASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Gm28450-201ENSMUST00000187349 638 ntBASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rprd1aQ8VDS4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Gm11511-201ENSMUST00000118146 540 ntBASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Gm12380-201ENSMUST00000119012 544 ntBASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Gm5419-201ENSMUST00000119301 527 ntBASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Gm16505-201ENSMUST00000179981 232 ntBASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rprd1aQ8VDS4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rprd1aQ8VDS4 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.34□□□□□ -0.43
Rprd1aQ8VDS4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rprd1aQ8VDS4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rprd1aQ8VDS4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rprd1aQ8VDS4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rprd1aQ8VDS4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rprd1aQ8VDS4 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rprd1aQ8VDS4 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rprd1aQ8VDS4 Gm23949-201ENSMUST00000104027 127 ntBASIC12.34□□□□□ -0.43
Rprd1aQ8VDS4 Gm15610-201ENSMUST00000120584 195 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms