Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Gm24255-201ENSMUST00000104481 128 ntBASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Gm8885-201ENSMUST00000189382 598 ntBASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Gm32999-201ENSMUST00000192693 562 ntBASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Gm43758-201ENSMUST00000199500 367 ntBASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim29Q8R2Q0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Gm5419-201ENSMUST00000119301 527 ntBASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Gm15276-201ENSMUST00000145953 498 ntBASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Gm27320-201ENSMUST00000184892 109 ntBASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.66□□□□□ -0.22
Trim29Q8R2Q0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.65□□□□□ -0.22
Trim29Q8R2Q0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms