Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm8492-201ENSMUST00000182375 987 ntBASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm29155-201ENSMUST00000185910 269 ntBASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm17877-201ENSMUST00000192578 814 ntBASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm7940-201ENSMUST00000218195 769 ntBASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp7Q8R1T1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Gm7150-201ENSMUST00000122032 981 ntBASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Gm42518-201ENSMUST00000196277 938 ntBASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Gm9661-201ENSMUST00000221611 1122 ntBASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp7Q8R1T1 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp7Q8R1T1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Gm43417-201ENSMUST00000201586 5207 ntBASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Gm16166-201ENSMUST00000118291 787 ntBASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Gm18159-201ENSMUST00000174516 1070 ntBASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Gm42657-201ENSMUST00000201746 211 ntBASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms