Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Gm25857-201ENSMUST00000082788 129 ntBASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cchcr1Q8K2I2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cchcr1Q8K2I2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gm11989-201ENSMUST00000117240 672 ntBASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gm11362-201ENSMUST00000118838 850 ntBASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gm7722-201ENSMUST00000120646 741 ntBASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gm14441-201ENSMUST00000121960 540 ntBASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gm17420-201ENSMUST00000164753 153 ntBASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gm27572-201ENSMUST00000183702 255 ntBASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gm18935-201ENSMUST00000212692 664 ntBASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cchcr1Q8K2I2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Gm12742-201ENSMUST00000117326 410 ntBASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Gm6114-201ENSMUST00000182472 968 ntBASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Gm3096-201ENSMUST00000185770 364 ntBASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Gm18893-201ENSMUST00000198416 943 ntBASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cchcr1Q8K2I2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cchcr1Q8K2I2 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cchcr1Q8K2I2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cchcr1Q8K2I2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cchcr1Q8K2I2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cchcr1Q8K2I2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cchcr1Q8K2I2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cchcr1Q8K2I2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cchcr1Q8K2I2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cchcr1Q8K2I2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms