Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.14□□□□□ -0.15
Nup88Q8CEC0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm12015-201ENSMUST00000117065 843 ntBASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm14832-201ENSMUST00000121289 322 ntBASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm12566-201ENSMUST00000121479 359 ntBASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Mir6927-201ENSMUST00000184494 71 ntBASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm44651-201ENSMUST00000207343 372 ntBASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm10312-201ENSMUST00000078515 489 ntBASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.13□□□□□ -0.15
Nup88Q8CEC0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup88Q8CEC0 Gm43984-201ENSMUST00000204572 2864 ntBASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Rprl1-202ENSMUST00000198476 238 ntBASIC14.12□□□□□ -0.15
Nup88Q8CEC0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup88Q8CEC0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms