Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Gm16177-201ENSMUST00000120728 718 ntBASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Gm3890-201ENSMUST00000182416 207 ntBASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Gm38241-201ENSMUST00000192641 898 ntBASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lysmd4Q8CC84 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Lysmd4Q8CC84 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lysmd4Q8CC84 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lysmd4Q8CC84 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lysmd4Q8CC84 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lysmd4Q8CC84 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lysmd4Q8CC84 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Lysmd4Q8CC84 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm7809-201ENSMUST00000153199 742 ntBASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm6222-202ENSMUST00000182143 629 ntBASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Lysmd4Q8CC84 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms