Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gm6023-201ENSMUST00000118217 606 ntBASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gm43118-201ENSMUST00000199149 775 ntBASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gm6007-201ENSMUST00000208170 823 ntBASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rft1Q8C3B8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.71□□□□□ -0.69
Rft1Q8C3B8 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Gm11793-201ENSMUST00000120433 981 ntBASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Gm8738-201ENSMUST00000172606 329 ntBASIC10.71□□□□□ -0.69
Rft1Q8C3B8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.71□□□□□ -0.69
Rft1Q8C3B8 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rft1Q8C3B8 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Rft1Q8C3B8 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rft1Q8C3B8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Rft1Q8C3B8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.71□□□□□ -0.7
Rft1Q8C3B8 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rft1Q8C3B8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Rft1Q8C3B8 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Rft1Q8C3B8 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Rft1Q8C3B8 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.71□□□□□ -0.7
Rft1Q8C3B8 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Rft1Q8C3B8 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rft1Q8C3B8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms