Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Gm8815-201ENSMUST00000173809 620 ntBASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Gm27910-201ENSMUST00000185004 107 ntBASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rd3Q8BRE0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Gm8194-201ENSMUST00000159783 859 ntBASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Gm6485-201ENSMUST00000160676 439 ntBASIC12.67□□□□□ -0.38
Rd3Q8BRE0 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Snora73b-201ENSMUST00000083419 205 ntBASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.67□□□□□ -0.38
Rd3Q8BRE0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rd3Q8BRE0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rd3Q8BRE0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms