Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.78□□□□□ -0.36
Smarcal1Q8BJL0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcal1Q8BJL0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcal1Q8BJL0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Smarcal1Q8BJL0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcal1Q8BJL0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcal1Q8BJL0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcal1Q8BJL0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcal1Q8BJL0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcal1Q8BJL0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Smarcal1Q8BJL0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcal1Q8BJL0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gm16071-201ENSMUST00000119589 793 ntBASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gm29155-201ENSMUST00000185910 269 ntBASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gm17826-201ENSMUST00000189720 798 ntBASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gm34023-201ENSMUST00000195539 217 ntBASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Smarcal1Q8BJL0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Gm24844-201ENSMUST00000158679 127 ntBASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Gm6485-201ENSMUST00000160676 439 ntBASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Gm28324-201ENSMUST00000187913 264 ntBASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Gm3551-201ENSMUST00000190750 664 ntBASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcal1Q8BJL0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcal1Q8BJL0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms