Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm19208-201ENSMUST00000213861 912 ntBASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Gm10312-201ENSMUST00000078515 489 ntBASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Depdc1bQ8BH88 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Depdc1bQ8BH88 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Depdc1bQ8BH88 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Depdc1bQ8BH88 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.02□□□□□ -0.32
Depdc1bQ8BH88 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Depdc1bQ8BH88 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Depdc1bQ8BH88 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Depdc1bQ8BH88 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.02□□□□□ -0.32
Depdc1bQ8BH88 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Gm24845-201ENSMUST00000158034 109 ntBASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Gm43138-201ENSMUST00000199123 708 ntBASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Gm44651-201ENSMUST00000207343 372 ntBASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Depdc1bQ8BH88 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Gm4909-201ENSMUST00000118749 794 ntBASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Nsd1-205ENSMUST00000224693 852 ntBASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Depdc1bQ8BH88 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Depdc1bQ8BH88 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Depdc1bQ8BH88 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Depdc1bQ8BH88 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Depdc1bQ8BH88 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms